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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28521251_28521750_F

Intron Information:

Intron Rank:

125343

Intron Class:

major

Intron Phase:

Intron Coordinates:

28521251 - 28521750

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

GTCTAAATGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

70.3

35.9

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

90.6

0.91

0.7

88.7

28.3

Minor 5ss

41.7

-0.9

3.2

54.8

49.4

Minor BPS

-0.2

2.1

67.61

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038129

28518256 - 28522644

4389