Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_28588861_28590195_F

Intron Information:

Intron Rank:

131332

Intron Class:

major

Intron Phase:

Intron Coordinates:

28588861 - 28590195

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGCTG

5'SS Class:

major

3'SS Sequence:

ATTTCTACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TCATTTCTACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

58.9

45.4

Major BPS

71.6

0.54

33.1

Major PPT

76.1

0.59

0.8

68.1

38.1

Minor 5ss

40.5

-1.1

3.3

55.9

48.3

Minor BPS

45.5

-0.3

1.8

54.53

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021105

28588144 - 28590337

2194