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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28971370_28971716_F

Intron Information:

Intron Rank:

141035

Intron Class:

major

Intron Phase:

Intron Coordinates:

28971370 - 28971716

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GGTGTCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

AGCTCCTGATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

78.8

0.71

67.6

40.6

Major PPT

68.4

0.41

58.3

43.1

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

56.6

0.28

1.8

72.32

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025797

28970886 - 28973734

2849