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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28983268_28986620_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28983268 - 28986620

Intron Length:

3353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGGCTGAA

5'SS Class:

weak_major

3'SS Sequence:

CTTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAC

U12 Branch Point Sequence:

CTGAGCTTGACC

Flanking Amino Acid:

MPVGLVDNGDDRSESI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.2

55.5

39.8

Major BPS

56.2

0.15

1.3

44.3

Major PPT

89.5

0.89

0.6

84.5

23.2

Minor 5ss

30.3

-2.3

3.3

30.3

43.5

Minor BPS

51.9

0.04

1.9

62.1

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010226

28980238 - 28986639

6402