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Intron Name: Anas_platyrhynchos_platyrhynchos_7_290078_292598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

290078 - 292598

Intron Length:

2521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAGAA

U12 Branch Point Sequence:

TTGTACAGAAGT

Flanking Amino Acid:

SNCMLNLASRGRKRQIPLSD

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.4

39.5

Major BPS

57.1

0.18

52.9

34.1

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

35.7

-1.6

3.3

47.1

48.3

Minor BPS

46.4

-0.1

2.2

71.06

45.1

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022758

264624 - 306968

42345

ENSAPLT00000018331

263911 - 307009

43099

ENSAPLT00000009339

268146 - 306968

38823

ENSAPLT00000045156

267812 - 306968

39157

ENSAPLT00000025359

264624 - 306968

42345