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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29069671_29069894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29069671 - 29069894

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTAATTTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CCTGTTCTAATT

Flanking Amino Acid:

TAESTDYCPKPDPKQKTIFE

Intron Amino Acid Position:

883

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.1

75.8

34.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.1

0.65

0.9

76.5

37.1

Minor 5ss

38.5

-1.3

3.2

45.2

Minor BPS

48.1

-0

1.7

62.82

42.7

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010292

29069455 - 29100854

31400

ENSAPLT00000036247

29069343 - 29100854

31512