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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29069992_29071349_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29069992 - 29071349

Intron Length:

1358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGAAGT

5'SS Class:

major

3'SS Sequence:

TTATCTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CTTTCAATAACA

Flanking Amino Acid:

VAKGTADDFLWPMIQEKIKV

Intron Amino Acid Position:

850

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

68.2

42.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.9

0.6

0.8

70.1

36.2

Minor 5ss

33.9

-1.8

3.3

45.8

44.4

Minor BPS

62.3

0.38

1.9

77.79

38.6

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036247

29069343 - 29100854

31512

ENSAPLT00000010292

29069455 - 29100854

31400