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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29071850_29072576_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29071850 - 29072576

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CGCCTTTTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAG

U12 Branch Point Sequence:

TAAGTACTATTT

Flanking Amino Acid:

DAIVEELEKKRVEYIRIDGS

Intron Amino Acid Position:

756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

55.4

0.13

1.6

63.6

42.5

Major PPT

76.6

0.6

0.8

71.4

32.9

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

39.8

-0.6

55.44

40.6

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036247

29069343 - 29100854

31512

ENSAPLT00000010292

29069455 - 29100854

31400