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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29074983_29075814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29074983 - 29075814

Intron Length:

832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTTCTTGGACT

Flanking Amino Acid:

AKKMAKGYGNKQQEKEALLL

Intron Amino Acid Position:

698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.9

40.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

86.5

0.82

0.7

81.3

23.7

Minor 5ss

-1.6

45.9

42.4

Minor BPS

70.9

0.74

1.4

86.19

33.2

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036247

29069343 - 29100854

31512

ENSAPLT00000010292

29069455 - 29100854

31400