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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29076034_29080189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29076034 - 29080189

Intron Length:

4156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTCAG

5'SS Class:

major

3'SS Sequence:

TGGTCTTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAC

U12 Branch Point Sequence:

ACGCTCATAACT

Flanking Amino Acid:

FGLRYCDAKQMPWGWDYSGS

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.1

63.4

42.5

Major BPS

65.3

0.38

1.1

66.2

36.5

Major PPT

76.9

0.61

0.9

41.8

Minor 5ss

39.7

-1.2

2.8

49.6

46.6

Minor BPS

54.4

0.22

1.6

68.37

42.3

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036247

29069343 - 29100854

31512

ENSAPLT00000010292

29069455 - 29100854

31400