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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29092197_29093221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29092197 - 29093221

Intron Length:

1025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTCCT

5'SS Class:

major

3'SS Sequence:

TTATTTCCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TGCCTCTTATTT

Flanking Amino Acid:

SLMPFQREGVNFAIFRNGRL

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

41.8

Major BPS

79.1

0.72

69.3

38.4

Major PPT

81.2

0.7

0.8

74.1

36.5

Minor 5ss

37.2

-1.4

3.3

39.6

Minor BPS

55.5

0.25

1.6

69.46

41.9

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036247

29069343 - 29100854

31512

ENSAPLT00000010292

29069455 - 29100854

31400