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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29093406_29096957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29093406 - 29096957

Intron Length:

3552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAA

U12 Branch Point Sequence:

TGATAACAAACT

Flanking Amino Acid:

NFLLEDYPKLVKMFQSLASV

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.2

38.5

Major BPS

0.08

61.4

34.3

Major PPT

85.5

0.8

80.4

31.5

Minor 5ss

34.7

-1.7

2.8

35.3

41.4

Minor BPS

42.6

-0.4

2.2

65.19

44.1

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010292

29069455 - 29100854

31400

ENSAPLT00000036247

29069343 - 29100854

31512