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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29097009_29097165_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29097009 - 29097165

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GTAACTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TTTGTTGTAACT

Flanking Amino Acid:

VFKQMNSRNYDAKTRKWNFL

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.1

43.2

Major BPS

75.6

0.64

1.5

34.5

Major PPT

70.4

0.46

62.8

42.6

Minor 5ss

32.9

-2

42.1

44.4

Minor BPS

58.5

0.35

2.1

82.56

39.6

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010292

29069455 - 29100854

31400

ENSAPLT00000036247

29069343 - 29100854

31512