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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29097430_29099164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29097430 - 29099164

Intron Length:

1735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTTCTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

GTTCTTTCCATG

Flanking Amino Acid:

NFSLEDYISFMEAANRLSSV

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

86.8

0.83

0.6

81.3

30.7

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

-0.7

1.9

48.95

39.4

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010292

29069455 - 29100854

31400

ENSAPLT00000036247

29069343 - 29100854

31512