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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29099216_29099896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29099216 - 29099896

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTACCCTAAAT

Flanking Amino Acid:

VFKKIPSKSYDPTMKKWNFS

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

72.7

0.51

0.8

70.1

35.1

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

59.9

0.39

1.9

79.14

42.3

Associated Gene:

Gene:

SMARCAL1

Ensembl Gene ID:

ENSAPLG00000009864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036247

29069343 - 29100854

31512

ENSAPLT00000010292

29069455 - 29100854

31400