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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29181159_29199591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29181159 - 29199591

Intron Length:

18433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTATGTTTATTT

Flanking Amino Acid:

MYGFMDIVCIGLIIHEGPSV

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

73.7

32.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

78.2

0.63

0.7

69.1

31.5

Minor 5ss

25.2

-2.9

3.2

30.3

43.5

Minor BPS

54.6

0.22

76.15

41.3

Associated Gene:

Gene:

MARCHF4

Ensembl Gene ID:

ENSAPLG00000020548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033531

29119105 - 29199953

80849