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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29232936_29233755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29232936 - 29233755

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTCTTCTAAATC

Flanking Amino Acid:

TDEGGDVDDLLDMM*

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

78.5

30.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

85.4

0.8

79.9

32.1

Minor 5ss

30.7

-2.2

2.5

31.6

35.9

Minor BPS

64.8

0.45

1.6

73.1

38.8

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980

ENSAPLT00000046751

29232864 - 29277235

44372