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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29247729_29248359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29247729 - 29248359

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

GGACCTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TGGTTTTGGACC

Flanking Amino Acid:

IKLAEGNVTSVGSVNPAEDF

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

78.4

37.9

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

68.2

0.41

0.9

61.8

39.7

Minor 5ss

41.2

-1

2.8

41.5

Minor BPS

53.1

0.08

1.5

62.15

37.7

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980

ENSAPLT00000046751

29232864 - 29277235

44372