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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29248454_29252682_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29248454 - 29252682

Intron Length:

4229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TCCTCATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TCATCCTCATTT

Flanking Amino Acid:

EKTAQDIFKDDNEDGHNPKK

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

73.9

32.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

82.3

0.73

0.8

76.6

30.8

Minor 5ss

40.8

-1

2.8

45.6

43.6

Minor BPS

0.27

1.8

72.99

44.1

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980

ENSAPLT00000046751

29232864 - 29277235

44372