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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29259988_29260645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29259988 - 29260645

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ACTTTCATGACT

Flanking Amino Acid:

LKVFAAKDDENAAVAFSALV

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

89.4

0.89

0.7

81.6

35.5

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

62.1

0.46

1.6

77.87

38.5

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980

ENSAPLT00000046751

29232864 - 29277235

44372