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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29260709_29264143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29260709 - 29264143

Intron Length:

3435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGAATCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

TAACCCCTGACC

Flanking Amino Acid:

SVLGFSRASQIQRHCYMGNQ

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.6

31.9

Major BPS

79.2

0.72

Major PPT

73.5

0.53

0.9

67.3

Minor 5ss

39.4

-1.2

52.1

45.1

Minor BPS

56.3

0.18

1.7

66.49

38.4

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980

ENSAPLT00000046751

29232864 - 29277235

44372