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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29268159_29270628_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29268159 - 29270628

Intron Length:

2470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCATCATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

GTTTTCTTGATT

Flanking Amino Acid:

GGGLEEIYTFRESLERLSMF

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

83.8

0.84

73.6

41.8

Major PPT

72.2

0.5

0.9

70.4

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

77.3

0.94

87.23

31.9

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046751

29232864 - 29277235

44372

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980