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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29270818_29271392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29270818 - 29271392

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTTGTGTTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATTTTCTGATTA

Flanking Amino Acid:

LKKTGTSLQFFLPFPVNDDD

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

76.5

38.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

78.4

0.64

0.8

77.1

37.1

Minor 5ss

41.9

-0.9

2.8

57.5

Minor BPS

56.9

0.21

1.7

70.18

36.2

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980

ENSAPLT00000046751

29232864 - 29277235

44372