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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29271516_29272751_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29271516 - 29272751

Intron Length:

1236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTTGTCTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAATAT

U12 Branch Point Sequence:

ATATTTCCAACA

Flanking Amino Acid:

VCMDLLQKETVGKKFEKRHI

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

74.7

41.5

Major BPS

58.7

0.22

1.1

55.4

Major PPT

79.1

0.65

83.4

Minor 5ss

41.3

-1

2.8

52.3

44.3

Minor BPS

48.7

-0.1

1.8

63.37

36.5

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046751

29232864 - 29277235

44372

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980