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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29272801_29273164_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

29272801 - 29273164

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TAATTTTGCTTAG|T

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATT

Flanking Amino Acid:

VIQPGSQQADFLDAIIVCMD

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

57.1

42.4

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.45

69.9

40.9

Minor 5ss

98.8

1.64

0.5

12.5

Minor BPS

90.1

1.34

0.7

99.4

21.6

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980

ENSAPLT00000046751

29232864 - 29277235

44372