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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29273349_29273884_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29273349 - 29273884

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGGTG

5'SS Class:

major

3'SS Sequence:

TCTCTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTGTATTGAATT

Flanking Amino Acid:

KVMTKFVQRQVFAESKDEVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

62.3

42.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.4

0.8

0.7

31.7

Minor 5ss

-1.2

3.6

55.1

49.2

Minor BPS

53.2

0.18

1.6

69.27

42.2

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020504

29232921 - 29278958

46038

ENSAPLT00000013354

29232921 - 29279900

46980

ENSAPLT00000046751

29232864 - 29277235

44372