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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29273999_29278795_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29273999 - 29278795

Intron Length:

4797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ACATTCTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

76.2

39.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.6

0.71

0.8

73.8

36.8

Minor 5ss

41.8

-0.9

3.2

57.8

46.8

Minor BPS

59.2

0.37

1.6

70.41

41.1

Associated Gene:

Gene:

XRCC5

Ensembl Gene ID:

ENSAPLG00000012767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020504

29232921 - 29278958

46038