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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29291338_29298302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29291338 - 29298302

Intron Length:

6965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTCTCTCTCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

64.3

47.1

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.67

0.8

78.1

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

51.2

0.12

2.1

75.83

41.7

Associated Gene:

Gene:

TMEM169

Ensembl Gene ID:

ENSAPLG00000012858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013380

29288582 - 29298448

9867