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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29301666_29306560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29301666 - 29306560

Intron Length:

4895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGACT

5'SS Class:

major

3'SS Sequence:

CATACTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TTTACCATACTT

Flanking Amino Acid:

LQCNIRKEEEVEDLVKTTLN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

76.1

39.5

Major BPS

68.1

0.45

73.5

28.6

Major PPT

69.2

0.43

0.9

65.8

40.5

Minor 5ss

40.4

-1.1

3.2

58.6

45.7

Minor BPS

57.7

0.32

1.9

81.74

39.8

Associated Gene:

Gene:

PECR

Ensembl Gene ID:

ENSAPLG00000012862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013410

29298469 - 29311757

13289