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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29307263_29308647_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29307263 - 29308647

Intron Length:

1385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTC|GTAATATGC

5'SS Class:

weak_major

3'SS Sequence:

CTTTTCTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

CTTTTCTCAATA

Flanking Amino Acid:

AAVQIGFPGMSHSGAARAAV

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.3

52.4

39.8

Major BPS

58.2

0.2

1.1

49.1

Major PPT

77.1

0.61

0.8

74.2

29.5

Minor 5ss

39.9

-1.1

51.5

39.8

Minor BPS

67.1

0.53

1.5

74.85

37.3

Associated Gene:

Gene:

PECR

Ensembl Gene ID:

ENSAPLG00000012862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013410

29298469 - 29311757

13289