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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29360312_29361162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29360312 - 29361162

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

GAAAACAAAACA

Flanking Amino Acid:

SNMIVHRDIKGANILRDSAG

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

92.7

0.96

0.6

85.4

29.3

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

41.7

-0.6

49.73

39.9

Associated Gene:

Gene:

MAP3K2

Ensembl Gene ID:

ENSAPLG00000012930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030912

29359577 - 29363297

3721

ENSAPLT00000013513

29334762 - 29363936

29175