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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29447413_29449805_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

29447413 - 29449805

Intron Length:

2393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CCCCCGGGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAG

U12 Branch Point Sequence:

GTGTACTGAGCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

1.3

78.8

35.5

Major BPS

59.6

0.24

1.5

57.3

41.7

Major PPT

59.3

0.21

36.7

Minor 5ss

38.4

-1.3

2.7

46.6

34.4

Minor BPS

48.8

-0.1

1.9

62.56

Associated Gene:

Gene:

HNMT

Ensembl Gene ID:

ENSAPLG00000022720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034646

29446472 - 29461714

15243