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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29457568_29460695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29457568 - 29460695

Intron Length:

3128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TCTTTGTTATGG

Flanking Amino Acid:

QAKLLIIVVSENSGWETLWK

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

77.3

0.68

81.5

Major PPT

0.68

0.9

77.2

37.1

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

43.4

-0.6

2.5

53.81

47.5

Associated Gene:

Gene:

HNMT

Ensembl Gene ID:

ENSAPLG00000022720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034646

29446472 - 29461714

15243