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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29489226_29489605_F

Intron Information:

Intron Rank:

150503

Intron Class:

major

Intron Phase:

Intron Coordinates:

29489226 - 29489605

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

ACTGCATTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

64.3

47.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.3

0.46

0.9

39.2

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

56.2

0.17

1.6

67.81

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043425

29488483 - 29489817

1335

ENSAPLT00000040740

29489097 - 29490935

1839