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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29617691_29621084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29617691 - 29621084

Intron Length:

3394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

GATTTTCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

CTTGCTGTGATT

Flanking Amino Acid:

PDDKLTLFCEVSVVQDSVNI

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

87.1

Major BPS

75.5

0.63

40.9

Major PPT

70.5

0.46

70.4

40.9

Minor 5ss

37.9

-1.4

3.1

50.4

46.1

Minor BPS

48.3

-0

2.1

69.68

42.6

Associated Gene:

Gene:

SPOPL

Ensembl Gene ID:

ENSAPLG00000008966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009360

29613479 - 29628309

14831