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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29622801_29625036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29622801 - 29625036

Intron Length:

2236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTATCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAA

U12 Branch Point Sequence:

TTTTCTTTTATC

Flanking Amino Acid:

ADNLLAAADKYALERLKVMC

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

69.4

0.48

1.2

63.4

44.3

Major PPT

88.3

0.86

0.8

89.3

25.7

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

72.5

0.69

1.5

82.19

31.8

Associated Gene:

Gene:

SPOPL

Ensembl Gene ID:

ENSAPLG00000008966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009360

29613479 - 29628309

14831