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Intron Name: Anas_platyrhynchos_platyrhynchos_7_2964440_2992620_F

Intron Information:

Intron Rank:

148122

Intron Class:

major

Intron Phase:

Intron Coordinates:

2964440 - 2992620

Intron Length:

28181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAA

U12 Branch Point Sequence:

CTGTCATCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

66.5

0.41

1.1

68.2

37.5

Major PPT

0.61

0.9

71.5

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

55.5

0.25

1.9

73.27

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040119

2897205 - 3125514

228310