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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29677711_29678216_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

29677711 - 29678216

Intron Length:

506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTTAGCAGT

5'SS Class:

weak_major

3'SS Sequence:

CGTCACCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GCTTCTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.5

0.16

1.3

57.7

46.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

73.6

0.53

0.9

65.6

35.7

Minor 5ss

39.5

-1.2

2.9

51.6

44.7

Minor BPS

78.5

0.97

1.1

84.22

37.1

Associated Gene:

Gene:

NXPH2

Ensembl Gene ID:

ENSAPLG00000001877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001871

29649230 - 29678660

29431