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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29789569_29801981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29789569 - 29801981

Intron Length:

12413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

ATTCCCTTAAGC

Flanking Amino Acid:

EGWVGMLCQTPTNRMKIT*

Intron Amino Acid Position:

1849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.1

40.6

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

95.2

1.02

0.5

91.6

19.5

Minor 5ss

37.2

-1.4

3.3

55.2

42.1

Minor BPS

71.5

0.65

1.6

78.53

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040789

29789543 - 29966531

176989

ENSAPLT00000029952

29789543 - 29966531

176989