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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29798139_29801981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29798139 - 29801981

Intron Length:

3843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

CTCTCTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TATGTACTAATA

Flanking Amino Acid:

EGWVGMLCQTQQKLTIQWNK

Intron Amino Acid Position:

1671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.1

40.6

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

80.4

0.68

0.7

31.9

Minor 5ss

37.2

-1.4

3.3

55.2

42.1

Minor BPS

47.1

-0.2

1.9

61.97

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020404

29797457 - 29966531

169075