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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29800284_29801981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29800284 - 29801981

Intron Length:

1698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

ATACTGAGAATT

Flanking Amino Acid:

EGWVGMLCQTLLLQ*

Intron Amino Acid Position:

1849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.1

40.6

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

100

1.12

0.4

100

Minor 5ss

37.2

-1.4

3.3

55.2

42.1

Minor BPS

40.3

-0.6

2.1

58.43

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042459

29799800 - 29966531

166732