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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29837913_29845292_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
29837913 - 29845292

Intron Length:
7380

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTTACT

5'SS Class:
major

3'SS Sequence:
CCTGTTTTGTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TCAAACACAACT

Flanking Amino Acid:
GRICSKVPRPAGYSEKNTGR

Intron Amino Acid Position:
1364

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1
77.5
37.2

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
71.9
0.49
1
72.6
37.6

Minor 5ss
37.4
-1.4
3
52.9
43.6

Minor BPS
45.5
-0.2
2
64.51
44.8

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

29831130 - 29966531
135402