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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29859924_29862683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29859924 - 29862683

Intron Length:

2760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCATTTTTATTT

Flanking Amino Acid:

SHPTGLCKLKENTCNIDGLC

Intron Amino Acid Position:

1017

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.1

25.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.7

0.71

0.9

79.6

32.3

Minor 5ss

39.6

-1.2

2.8

49.5

46.6

Minor BPS

51.4

0.12

1.6

63.14

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009255

29831130 - 29966531

135402

ENSAPLT00000044658

29789554 - 29964865

175312

ENSAPLT00000009245

29789554 - 29927549

137996

ENSAPLT00000042459

29799800 - 29966531

166732

ENSAPLT00000008889

29819749 - 29966531

146783

ENSAPLT00000029952

29789543 - 29966531

176989

ENSAPLT00000020404

29797457 - 29966531

169075

ENSAPLT00000048184

29789554 - 29966531

176978