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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29867463_29868522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29867463 - 29868522

Intron Length:

1060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGCATC

5'SS Class:

major

3'SS Sequence:

TGTTTTACTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTCTGTTTTACT

Flanking Amino Acid:

NLHCEVTRLIHLNGEWISRE

Intron Amino Acid Position:

928

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

70.9

39.2

Major BPS

68.8

0.47

1.2

63.4

Major PPT

79.6

0.67

0.8

75.1

34.6

Minor 5ss

46.5

-0.4

2.9

67.1

37.9

Minor BPS

0.3

2.1

79.47

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009245

29789554 - 29927549

137996

ENSAPLT00000040789

29789543 - 29966531

176989

ENSAPLT00000008889

29819749 - 29966531

146783

ENSAPLT00000029952

29789543 - 29966531

176989

ENSAPLT00000048184

29789554 - 29966531

176978

ENSAPLT00000020404

29797457 - 29966531

169075

ENSAPLT00000044658

29789554 - 29964865

175312

ENSAPLT00000009255

29831130 - 29966531

135402

ENSAPLT00000042459

29799800 - 29966531

166732