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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29899388_29902064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29899388 - 29902064

Intron Length:

2677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGGTCC

5'SS Class:

major

3'SS Sequence:

TCATTTTAACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTCATTTTAACT

Flanking Amino Acid:

WRAHTPKDVKVTVRDLPTGN

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.2

68.6

37.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

68.1

0.41

63.6

41.8

Minor 5ss

34.4

-1.8

3.1

44.1

Minor BPS

73.3

0.81

1.2

83.78

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009255

29831130 - 29966531

135402

ENSAPLT00000042459

29799800 - 29966531

166732

ENSAPLT00000009245

29789554 - 29927549

137996

ENSAPLT00000040789

29789543 - 29966531

176989

ENSAPLT00000008889

29819749 - 29966531

146783

ENSAPLT00000029952

29789543 - 29966531

176989

ENSAPLT00000048184

29789554 - 29966531

176978

ENSAPLT00000020404

29797457 - 29966531

169075

ENSAPLT00000044658

29789554 - 29964865

175312