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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29919296_29928661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29919296 - 29928661

Intron Length:

9366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTCAGTAAA

5'SS Class:

major

3'SS Sequence:

TGTGCATCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TTGCCACAAACT

Flanking Amino Acid:

PAEMPTRCVEMNKCGTQAPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.3

33.6

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

70.6

0.46

0.9

66.6

39.6

Minor 5ss

32.2

-2

2.6

34.5

34.7

Minor BPS

46.4

-0.1

2.2

71.62

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020404

29797457 - 29966531

169075

ENSAPLT00000044658

29789554 - 29964865

175312

ENSAPLT00000009255

29831130 - 29966531

135402

ENSAPLT00000042459

29799800 - 29966531

166732

ENSAPLT00000008889

29819749 - 29966531

146783

ENSAPLT00000040789

29789543 - 29966531

176989

ENSAPLT00000029952

29789543 - 29966531

176989

ENSAPLT00000048184

29789554 - 29966531

176978