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Intron Name: Anas_platyrhynchos_platyrhynchos_7_2992735_3125169_F

Intron Information:

Intron Rank:

148123

Intron Class:

major

Intron Phase:

Intron Coordinates:

2992735 - 3125169

Intron Length:

132435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

GCTTTCTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

85.5

0.8

79.8

32.3

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

-0.1

1.8

56.62

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040119

2897205 - 3125514

228310