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Intron Name: Anas_platyrhynchos_platyrhynchos_7_29928847_29966434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29928847 - 29966434

Intron Length:

37588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TCTCACTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GCTTCTTTAATC

Flanking Amino Acid:

LAINSESAPLAPECSPAGHR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

83.7

0.76

0.8

80.6

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

75.3

0.77

1.1

74.58

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009255

29831130 - 29966531

135402

ENSAPLT00000042459

29799800 - 29966531

166732

ENSAPLT00000008889

29819749 - 29966531

146783

ENSAPLT00000040789

29789543 - 29966531

176989

ENSAPLT00000029952

29789543 - 29966531

176989

ENSAPLT00000020404

29797457 - 29966531

169075

ENSAPLT00000048184

29789554 - 29966531

176978