Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_29999789_30000619_R

Intron Information:

Intron Rank:

149627

Intron Class:

major

Intron Phase:

Intron Coordinates:

29999789 - 30000619

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCAGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCCCTATTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

81.9

0.79

0.8

81.9

Major PPT

70.1

0.45

70.1

35.5

Minor 5ss

35.1

-1.7

2.7

42.8

Minor BPS

57.1

0.2

1.6

64.34

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037116

29999128 - 30014126

14999