Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_30061656_30063186_R

Intron Information:

Intron Rank:

129297

Intron Class:

major

Intron Phase:

Intron Coordinates:

30061656 - 30063186

Intron Length:

1531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGAAA

5'SS Class:

major

3'SS Sequence:

TGTTTGAGTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAG

U12 Branch Point Sequence:

TCTTGTTTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.9

38.7

Major BPS

54.7

0.12

1.7

57.1

49.4

Major PPT

73.2

0.52

1.1

70.4

44.5

Minor 5ss

30.6

-2.2

3.3

39.7

45.9

Minor BPS

0.14

2.1

74.14

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023962

30049703 - 30063478

13776